6V6W
Crystal structure of antibody 438-B11 DSS mutant (Cys98A-100aA) in complex with an uncleaved prefusion optimized (UFO) soluble BG505 trimer and Fab 35O22
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL12-2 |
Synchrotron site | SSRL |
Beamline | BL12-2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-11-05 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.97946 |
Spacegroup name | H 3 |
Unit cell lengths | 148.534, 148.534, 843.554 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 46.720 - 6.500 |
R-factor | 0.3112 |
Rwork | 0.309 |
R-free | 0.35520 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6utk |
RMSD bond length | 0.003 |
RMSD bond angle | 0.643 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.16_3549) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 6.620 |
High resolution limit [Å] | 6.500 | 6.500 |
Rpim | 0.090 | 0.640 |
Number of reflections | 13313 | 638 |
<I/σ(I)> | 1 | |
Completeness [%] | 97.5 | |
Redundancy | 4.2 | |
CC(1/2) | 0.850 | 0.620 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 277.15 | 12% 1-propanol, 0.1M MES (pH=6.5), 20% polyethylene glycol monomethyl ether 5000, 25% glycerol |