6V1B
Crystal structure of the bromodomain of human BRD9 bound to I-BRD9
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 22-ID |
Synchrotron site | APS |
Beamline | 22-ID |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-06-21 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 1.0 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 56.990, 38.500, 60.920 |
Unit cell angles | 90.00, 108.99, 90.00 |
Refinement procedure
Resolution | 57.610 - 1.350 |
R-factor | 0.1831 |
Rwork | 0.183 |
R-free | 0.20250 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6uzf |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (1.17.1_3660) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 57.610 | 57.610 | 1.390 |
High resolution limit [Å] | 1.350 | 6.040 | 1.350 |
Rmerge | 0.045 | 0.033 | 0.571 |
Rmeas | 0.053 | 0.038 | 0.667 |
Total number of observations | 200920 | ||
Number of reflections | 53866 | 619 | 3956 |
<I/σ(I)> | 12.83 | 29.6 | 1.98 |
Completeness [%] | 97.4 | 91.4 | 97 |
Redundancy | 3.73 | 3.648 | 3.75 |
CC(1/2) | 0.998 | 0.997 | 0.859 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 291 | 0.1 M KSCN, 30% w/v PEG MME 2,000 |