6UHM
Crystal Structure of a Physical Mixture of C148 mGFP and scDNA-1
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-F |
Synchrotron site | APS |
Beamline | 21-ID-F |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2019-07-09 |
Detector | RAYONIX MX-300 |
Wavelength(s) | 0.97872 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 58.280, 61.760, 135.320 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 56.250 - 2.100 |
R-factor | 0.2139 |
Rwork | 0.211 |
R-free | 0.27010 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5n9o |
RMSD bond length | 0.008 |
RMSD bond angle | 1.671 |
Data reduction software | iMOSFLM |
Data scaling software | SCALA |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0257) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 67.660 | 61.760 | 2.210 |
High resolution limit [Å] | 2.100 | 6.640 | 2.100 |
Rmerge | 0.051 | 0.503 | |
Rmeas | 0.079 | 0.055 | 0.534 |
Rpim | 0.026 | 0.020 | 0.177 |
Total number of observations | 250177 | ||
Number of reflections | 29215 | 1057 | 4155 |
<I/σ(I)> | 14.5 | 29 | 3.7 |
Completeness [%] | 99.8 | 99.8 | 99.4 |
Redundancy | 8.6 | 7.5 | 8.7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.4 | 295 | 1 microliter of a physical mixture of C148 mGFP and scDNA-1 (5 mg/mL C148 mGFP and equimolar scDNA-1 in 10 mM Tris Buffer pH 7.4, 137 mM NaCl) + 1 microliter crystallization condition (0.1 M sodium acetate, 25% (w/v) PEG 4000, 8% (v/v) isopropanol) in a sitting drop with a 70 microliter reservoir (0.1 M sodium acetate, 25% (w/v) PEG 4000, 8% (v/v) isopropanol) |