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6UHM

Crystal Structure of a Physical Mixture of C148 mGFP and scDNA-1

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 21-ID-F
Synchrotron siteAPS
Beamline21-ID-F
Temperature [K]100
Detector technologyCCD
Collection date2019-07-09
DetectorRAYONIX MX-300
Wavelength(s)0.97872
Spacegroup nameP 21 21 21
Unit cell lengths58.280, 61.760, 135.320
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution56.250 - 2.100
R-factor0.2139
Rwork0.211
R-free0.27010
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5n9o
RMSD bond length0.008
RMSD bond angle1.671
Data reduction softwareiMOSFLM
Data scaling softwareSCALA
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0257)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]67.66061.7602.210
High resolution limit [Å]2.1006.6402.100
Rmerge0.0510.503
Rmeas0.0790.0550.534
Rpim0.0260.0200.177
Total number of observations250177
Number of reflections2921510574155
<I/σ(I)>14.5293.7
Completeness [%]99.899.899.4
Redundancy8.67.58.7
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7.42951 microliter of a physical mixture of C148 mGFP and scDNA-1 (5 mg/mL C148 mGFP and equimolar scDNA-1 in 10 mM Tris Buffer pH 7.4, 137 mM NaCl) + 1 microliter crystallization condition (0.1 M sodium acetate, 25% (w/v) PEG 4000, 8% (v/v) isopropanol) in a sitting drop with a 70 microliter reservoir (0.1 M sodium acetate, 25% (w/v) PEG 4000, 8% (v/v) isopropanol)

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PDB entries from 2024-06-12

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