6U94
Structure of RND efflux system, outer membrane lipoprotein, NodT family from Burkholderia mallei ATCC 23344
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-G |
Synchrotron site | APS |
Beamline | 21-ID-G |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2019-04-18 |
Detector | RAYONIX MX-300 |
Wavelength(s) | 0.97856 |
Spacegroup name | H 3 2 |
Unit cell lengths | 93.440, 93.440, 370.790 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 30.480 - 2.350 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3d5k |
RMSD bond length | 0.002 |
RMSD bond angle | 0.425 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | MR-Rosetta |
Refinement software | PHENIX |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 30.480 | 2.400 |
High resolution limit [Å] | 2.350 | 2.350 |
Rmerge | 0.051 | 0.615 |
Number of reflections | 26543 | 1932 |
<I/σ(I)> | 22.5 | 2.08 |
Completeness [%] | 99.8 | |
Redundancy | 7.36 | |
CC(1/2) | 0.990 | 0.972 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 298 | 30 mM magnesium chloride hexahydrate, 30 mM calcium chloride dihydrate, 0.1 M Tris base, BICINE, pH 8.5, 20% v/v ethylene glycol, 10% w/v PEG8000 |