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6TOH

Crystal structure of human BCL6 BTB domain in complex with compound 6

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE MASSIF-1
Synchrotron siteESRF
BeamlineMASSIF-1
Temperature [K]100
Detector technologyPIXEL
Collection date2015-08-07
DetectorDECTRIS PILATUS3 2M
Wavelength(s)0.9660
Spacegroup nameP 61 2 2
Unit cell lengths67.785, 67.785, 165.983
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution47.930 - 1.580
R-factor0.174
Rwork0.173
R-free0.19700
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3bim
RMSD bond length0.010
RMSD bond angle0.980
Data reduction softwareXDS
Data scaling softwareAimless (0.5.26)
Phasing softwarePHASER
Refinement softwareBUSTER (2.10.3)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]47.93047.9301.640
High resolution limit [Å]1.5806.1201.580
Rmerge0.0740.0442.168
Rmeas0.0760.0462.225
Rpim0.0180.0110.498
Total number of observations5988301064659229
Number of reflections319076863048
<I/σ(I)>21591.7
Completeness [%]100.099.8100
Redundancy18.815.519.4
CC(1/2)0.9990.9990.677
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP72912 microlitre of the BCL6-BTB/WVIP complex at 4 mg/mL plus 1 microliter of a crystallisation solution consisting of 1 M K2HPO4, 0.7 M NaH2PO4, 75 mM sodium acetate buffer pH 4.5 and 2 % DMSO, against 350 microliter of crystallisation solution.

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