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6T7H

Crystal structure of Thrombin in complex with macrocycle N14-PR4-A

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I03
Synchrotron siteDiamond
BeamlineI03
Temperature [K]100
Detector technologyPIXEL
Collection date2019-07-04
DetectorDECTRIS EIGER2 X 16M
Wavelength(s)0.9762
Spacegroup nameP 21 21 21
Unit cell lengths64.664, 101.343, 119.129
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution29.960 - 2.320
R-factor0.1962
Rwork0.194
R-free0.23920
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)6gwe
RMSD bond length0.012
RMSD bond angle1.917
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0257)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]29.9602.410
High resolution limit [Å]2.3202.320
Rmerge0.0780.844
Number of reflections343483248
<I/σ(I)>22.7
Completeness [%]99.797.2
Redundancy13.613.7
CC(1/2)1.0000.906
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP29318 % w/v PEG 4000 0.1 M Tris pH 9.0 0.3 M Sodium acetate trihydrate 20 % v/v Ethylene glycol

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