6SUN
Amicoumacin kinase hAmiN in complex with AMP-PNP, Ca2+ and Ami
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PETRA III, EMBL c/o DESY BEAMLINE P14 (MX2) |
Synchrotron site | PETRA III, EMBL c/o DESY |
Beamline | P14 (MX2) |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-06-14 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.980 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 126.640, 54.460, 64.630 |
Unit cell angles | 90.00, 113.28, 90.00 |
Refinement procedure
Resolution | 59.370 - 1.350 |
R-factor | 0.1433 |
Rwork | 0.141 |
R-free | 0.17590 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.010 |
RMSD bond angle | 1.524 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0155) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 60.000 | 1.390 |
High resolution limit [Å] | 1.350 | 1.350 |
Rmerge | 0.086 | 2.770 |
Rmeas | 0.089 | 2.870 |
Number of reflections | 88781 | 6187 |
<I/σ(I)> | 13.5 | 2 |
Completeness [%] | 97.0 | 95 |
Redundancy | 13.8 | 14.1 |
CC(1/2) | 0.999 | 0.681 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 293 | 0.1 M MES pH6.5 0.2 M NaOAc 27-29% (w/v) PEG 2000MME 2 mM amiA 2.2 mM AMP-PNP 20 mM Ca2+ |