6SIY
PaaK family AMP-ligase with AMP and substrate
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I03 |
Synchrotron site | Diamond |
Beamline | I03 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-05-18 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.97625 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 107.373, 138.584, 130.414 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 69.290 - 1.950 |
R-factor | 0.1883 |
Rwork | 0.186 |
R-free | 0.22870 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6siw |
RMSD bond length | 0.006 |
RMSD bond angle | 1.455 |
Data reduction software | xia2 |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0253) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 69.290 | 1.980 |
High resolution limit [Å] | 1.950 | 1.950 |
Rmerge | 0.060 | 0.841 |
Number of reflections | 70886 | 3771 |
<I/σ(I)> | 13.2 | 1.4 |
Completeness [%] | 100.0 | 99.6 |
Redundancy | 7.1 | 6.5 |
CC(1/2) | 0.999 | 0.510 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | 0.2 M KSCN, 0.1 M sodium citrate pH 6.0, 30% PEG MME 2K |