6PZF
Crystal structure of human NA-63 Fab in complex with neuraminidase from A/Hunan/02650/2016(H7N9)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 23-ID-D |
Synchrotron site | APS |
Beamline | 23-ID-D |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-06-20 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 1.03319 |
Spacegroup name | P 4 21 2 |
Unit cell lengths | 164.576, 164.576, 192.575 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 49.800 - 2.800 |
R-factor | 0.2055 |
Rwork | 0.203 |
R-free | 0.24860 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5l14 5it2 5v7r |
RMSD bond length | 0.009 |
RMSD bond angle | 1.252 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX ((1.12_2829)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 49.800 | 2.850 |
High resolution limit [Å] | 2.800 | 2.800 |
Rpim | 0.060 | 0.350 |
Number of reflections | 63525 | 2555 |
<I/σ(I)> | 10 | 1 |
Completeness [%] | 96.5 | |
Redundancy | 8.4 | |
CC(1/2) | 0.998 | 0.853 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 9 | 293 | 0.1 M Tris pH 9.0, 10% glycerol, 10% PEG6000 |