Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6P3K

Crystal structure of LigU(C100S)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRL BEAMLINE BL14-1
Synchrotron siteSSRL
BeamlineBL14-1
Temperature [K]100
Detector technologyPIXEL
Collection date2019-04-19
DetectorDECTRIS EIGER X 16M
Wavelength(s)1.1271
Spacegroup nameC 1 2 1
Unit cell lengths97.417, 142.334, 60.350
Unit cell angles90.00, 111.72, 90.00
Refinement procedure
Resolution42.020 - 1.880
R-factor0.1752
Rwork0.173
R-free0.21500
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3g7k
RMSD bond length0.014
RMSD bond angle1.249
Data reduction softwareHKL-2000 (2.3.10)
Data scaling softwareHKL-2000 (2.3.10)
Phasing softwarePHASER (2.8.3)
Refinement softwarePHENIX (1.15.2_3472)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0001.910
High resolution limit [Å]1.8805.1001.880
Rmerge0.0460.0290.242
Rmeas0.0550.0350.315
Rpim0.0300.0190.200
Number of reflections5393929281447
<I/σ(I)>22.12.1
Completeness [%]87.393.247.1
Redundancy2.93.31.8
CC(1/2)0.9980.915
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7.5291Well - 200 mM magnesium chloride hexahydrate, 100 mM HEPES/KOH, pH 7.5, 25% (w/v) PEG 3350 Drop - 2 uL enzyme, 2 uL well where the enzyme concentration was 10 mg/mL in 20 mM phosphate buffer pH 7.9

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon