6OGQ
X-ray crystal structure of darunavir-resistant HIV-1 protease (P30) in complex with GRL-003
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL41XU |
Synchrotron site | SPring-8 |
Beamline | BL41XU |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-11-01 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.0 |
Spacegroup name | P 61 2 2 |
Unit cell lengths | 62.823, 62.823, 82.154 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 45.360 - 1.410 |
R-factor | 0.20036 |
Rwork | 0.199 |
R-free | 0.23452 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5tyr |
RMSD bond length | 0.014 |
RMSD bond angle | 1.834 |
Data reduction software | xia2 |
Data scaling software | xia2 |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0238) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 45.360 | 1.460 |
High resolution limit [Å] | 1.410 | 1.410 |
Number of reflections | 19097 | 1876 |
<I/σ(I)> | 12.75 | |
Completeness [%] | 99.9 | |
Redundancy | 18.2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 298 | 0.15 M Ammonium sulfate, 0.1 M HEPES (pH 7.0), 25% (w/v) PEG4000 |