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6MTX

Crystal structure of a human anti-ZIKV-DENV neutralizing antibody MZ1 isolated following ZPIV vaccination

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 19-ID
Synchrotron siteAPS
Beamline19-ID
Temperature [K]100
Detector technologyPIXEL
Collection date2017-11-01
DetectorDECTRIS PILATUS3 S 6M
Wavelength(s)0.97
Spacegroup nameP 21 21 21
Unit cell lengths59.773, 66.806, 138.067
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution19.975 - 2.051
R-factor0.1772
Rwork0.175
R-free0.20970
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4uta
RMSD bond length0.007
RMSD bond angle0.889
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHASER
Refinement softwarePHENIX (1.11.1_2575)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0002.120
High resolution limit [Å]2.0502.050
Rmerge0.200
Rmeas0.220
Rpim0.0800.540
Number of reflections355483263
<I/σ(I)>9
Completeness [%]94.8
Redundancy5.2
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP4.62910.2 M ammonium sulfate, 0.1 M sodium acetate trihydrate (pH 4.6) and 25% (w/v) polyethylene glycol 4000

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