6M1V
Crystal structure of post fusion core of 2019-nCoV S2 subunit
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL17U1 |
Synchrotron site | SSRF |
Beamline | BL17U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-02-11 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.97918 |
Spacegroup name | P 3 2 1 |
Unit cell lengths | 42.666, 42.666, 106.648 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 21.620 - 1.500 |
R-factor | 0.2038 |
Rwork | 0.203 |
R-free | 0.21200 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1wnc |
RMSD bond length | 0.005 |
RMSD bond angle | 0.701 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.16_3549) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 1.550 |
High resolution limit [Å] | 1.500 | 1.500 |
Number of reflections | 18825 | 1838 |
<I/σ(I)> | 49 | |
Completeness [%] | 100.0 | 100 |
Redundancy | 18.1 | |
CC(1/2) | 1.000 | 0.996 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 291 | 0.1 M bis-tris, pH 6.5, and 25% (wt/vol) polyethylene glycol 3350 |