6LQW
Crystal structure of a dimeric yak lactoperoxidase at 2.59 A resolution.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | RRCAT INDUS-2 BEAMLINE PX-BL21 |
Synchrotron site | RRCAT INDUS-2 |
Beamline | PX-BL21 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2019-12-04 |
Detector | MARMOSAIC 325 mm CCD |
Wavelength(s) | 0.97 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 81.295, 96.732, 83.931 |
Unit cell angles | 90.00, 90.30, 90.00 |
Refinement procedure
Resolution | 40.640 - 2.600 |
R-factor | 0.2137 |
Rwork | 0.212 |
R-free | 0.29230 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6L3Z |
RMSD bond length | 0.009 |
RMSD bond angle | 1.109 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | MOLREP |
Refinement software | PHENIX (1.14_3260) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 40.640 | 2.670 |
High resolution limit [Å] | 2.590 | 2.590 |
Rmerge | 0.120 | 0.447 |
Rmeas | 0.140 | 0.521 |
Rpim | 0.072 | 0.266 |
Number of reflections | 40278 | 3537 |
<I/σ(I)> | 6.5 | 2.3 |
Completeness [%] | 98.7 | 88 |
Redundancy | 3.8 | |
CC(1/2) | 0.980 | 0.840 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8 | 298 | 0.2M Ammonium formate, 20% PEG 3350 |