6LGY
Crystal structure of a cysteine-pair mutant (P10C-S291C) of a bacterial bile acid transporter in an inward-facing state complexed with glycine and sodium
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL18U1 |
Synchrotron site | SSRF |
Beamline | BL18U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-04-22 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.97853 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 45.469, 185.578, 75.081 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 34.800 - 2.247 |
R-factor | 0.209 |
Rwork | 0.207 |
R-free | 0.24290 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6lgv |
Data reduction software | XDS |
Data scaling software | Aimless (0.7.4) |
Phasing software | PHASER |
Refinement software | PHENIX (1.13_2998) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 38.066 | 38.066 | 2.285 |
High resolution limit [Å] | 2.247 | 6.090 | 2.247 |
Rmerge | 0.114 | 0.033 | 0.919 |
Rmeas | 0.128 | 0.037 | 1.029 |
Rpim | 0.057 | 0.016 | 0.448 |
Total number of observations | 78877 | 4022 | 4102 |
Number of reflections | 15449 | 809 | 776 |
<I/σ(I)> | 10.4 | 31.5 | 1.9 |
Completeness [%] | 98.8 | 93.2 | 99.1 |
Redundancy | 5.1 | 5 | 5.3 |
CC(1/2) | 0.996 | 0.999 | 0.449 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | LIPIDIC CUBIC PHASE | 8.5 | 293.15 | 0.05 M Na2SO4, 0.05 M Li2SO4, 0.05 M Tris-HCl pH 8.5, 35% PEG 400, 0.8 mM CHAPSO, with 100 mM glycine pH 7.3 soaking |