6KO9
Crystal structure of the Gefitinib Intermediate 1 bound RamR determined with XtaLAB Synergy
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU FR-X |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-11-25 |
Detector | RIGAKU HyPic-6000HE |
Wavelength(s) | 1.5406 |
Spacegroup name | P 1 |
Unit cell lengths | 43.513, 54.792, 92.224 |
Unit cell angles | 74.64, 81.94, 89.98 |
Refinement procedure
Resolution | 18.440 - 2.200 |
R-factor | 0.2236 |
Rwork | 0.220 |
R-free | 0.29920 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3vvy |
RMSD bond length | 0.009 |
RMSD bond angle | 1.566 |
Data reduction software | CrysalisPro |
Data scaling software | Aimless (0.7.4) |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0238) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 18.440 | 18.440 | 2.270 |
High resolution limit [Å] | 2.200 | 8.800 | 2.200 |
Rmerge | 0.106 | 0.078 | 0.587 |
Rmeas | 0.123 | 0.092 | 0.760 |
Rpim | 0.062 | 0.047 | 0.476 |
Total number of observations | 138507 | 1565 | 8684 |
Number of reflections | 40974 | 525 | 3779 |
<I/σ(I)> | 6.2 | 12.8 | 1.9 |
Completeness [%] | 99.3 | 81.9 | 98.9 |
Redundancy | 3.4 | 3 | 2.3 |
CC(1/2) | 0.992 | 0.989 | 0.565 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5.6 | 298 | PEG3350, ammonium sulfate, sodium Citrate |