6KL2
Structure of the N-terminal domain of Middle East respiratory syndrome coronavirus nucleocapsid protein
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSRRC BEAMLINE BL13B1 |
Synchrotron site | NSRRC |
Beamline | BL13B1 |
Temperature [K] | 110 |
Detector technology | CCD |
Collection date | 2015-04-05 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 1.00000 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 35.601, 109.645, 91.993 |
Unit cell angles | 90.00, 101.23, 90.00 |
Refinement procedure
Resolution | 23.472 - 2.630 |
R-factor | 0.281 |
Rwork | 0.280 |
R-free | 0.28980 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4j3k |
RMSD bond length | 0.013 |
RMSD bond angle | 1.590 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | MOLREP |
Refinement software | PHENIX (1.14_3260) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 30.000 | 30.000 | 2.720 |
High resolution limit [Å] | 2.627 | 5.650 | 2.630 |
Rmerge | 0.095 | 0.037 | 0.493 |
Rmeas | 0.103 | 0.040 | 0.540 |
Rpim | 0.038 | 0.014 | 0.216 |
Number of reflections | 19546 | 2066 | 1872 |
<I/σ(I)> | 8.3 | ||
Completeness [%] | 94.5 | 97.5 | 91.4 |
Redundancy | 7.1 | 7.4 | 5.9 |
CC(1/2) | 0.998 | 0.841 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 5 mg/mL protein, 25 mM Tris-HCl, pH 7.5, 75 mM NaCl, 70 mM MES, pH5.5, 37.5 M (NH4)2SO4, 14.5 % PEG 3350, 1 mM NaBr |