6IUY
Structure of DsGPDH of Dunaliella salina
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X10SA |
Synchrotron site | SLS |
Beamline | X10SA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-02-03 |
Detector | DECTRIS PILATUS 300K |
Wavelength(s) | 1.000021 |
Spacegroup name | P 41 2 2 |
Unit cell lengths | 91.335, 91.335, 348.319 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 47.362 - 2.200 |
R-factor | 0.2014 |
Rwork | 0.199 |
R-free | 0.24760 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1wpq |
RMSD bond length | 0.008 |
RMSD bond angle | 1.183 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 47.362 | 47.362 | 2.330 |
High resolution limit [Å] | 2.200 | 6.550 | 2.200 |
Rmerge | 0.161 | 0.030 | 2.160 |
Rmeas | 0.164 | 0.031 | 2.201 |
Total number of observations | 3988632 | ||
Number of reflections | 142895 | 5405 | 23022 |
<I/σ(I)> | 21.82 | 111.36 | 1.69 |
Completeness [%] | 99.9 | 99.8 | 99.6 |
Redundancy | 27.913 | 28.476 | 27.453 |
CC(1/2) | 0.999 | 1.000 | 0.590 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 293.15 | 10 mM NAD+, 10 mM DHAP, 56% Tacsimate pH 7.5 (Hampton) |