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6HGX

Soluble epoxide hydrolase in complex with 1-(4-((4-(tert-butyl)morpholin-2-yl)methoxy)phenyl)-3-cyclohexylurea

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE ID29
Synchrotron siteESRF
BeamlineID29
Temperature [K]100
Detector technologyPIXEL
Collection date2017-09-16
DetectorDECTRIS PILATUS 6M
Wavelength(s)1.072
Spacegroup nameI 2 2 2
Unit cell lengths79.800, 92.000, 105.700
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution52.850 - 2.160
R-factor0.2073
Rwork0.202
R-free0.25360
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)6fr2
RMSD bond length0.008
RMSD bond angle1.006
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHASER
Refinement softwarePHENIX
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]52.85052.8502.210
High resolution limit [Å]2.1509.6302.150
Rmerge0.1310.0421.016
Rmeas0.1430.0471.104
Number of reflections213192821436
<I/σ(I)>10.2834.31.39
Completeness [%]99.398.991
Redundancy6.3625.956.407
CC(1/2)0.9960.9970.724
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP2771 uL protein solution Protein (5-10 mg/mL , 50 mM NaCl, 50 mM sodium phosphate, 10% glycerol (98%), 2 mM DTT at pH 7.4) was mixed in different ratios (2/1, 1/1, 1/2) with precipitant solution (23 %-28 % (w/v) polyethylenglycol (PEG) 6000, 70 mM ammonium acetat, 200 mM magnesium acetat, 100 mM sodium cacodylate at pH 6.1-6.5)

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PDB entries from 2024-05-15

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