6HEX
Crystal Structure of Ephrin A2 (EphA2) Receptor Protein Kinase with the NVP-BHG712 derivative ATMM006
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PETRA III, EMBL c/o DESY BEAMLINE P13 (MX1) |
Synchrotron site | PETRA III, EMBL c/o DESY |
Beamline | P13 (MX1) |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-09-15 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 1.03318 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 32.831, 107.218, 40.533 |
Unit cell angles | 90.00, 108.76, 90.00 |
Refinement procedure
Resolution | 31.086 - 1.413 |
R-factor | 0.1599 |
Rwork | 0.159 |
R-free | 0.17850 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6fnf |
RMSD bond length | 0.012 |
RMSD bond angle | 1.054 |
Data reduction software | XDS (XDSapp 2.0) |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX ((1.10.1_2155: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 38.380 | 1.500 |
High resolution limit [Å] | 1.410 | 1.410 |
Rmeas | 0.112 | |
Number of reflections | 47501 | 6570 |
<I/σ(I)> | 10.76 | 2.82 |
Completeness [%] | 93.6 | 79.9 |
Redundancy | 7.05 | 6.87 |
CC(1/2) | 0.996 | 0.843 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 291 | 37.5 % MPD/PEG1000/PEG3350 (MD), 0.1 M Amino Acids Mix (MD), 0.1 M MES pH 6.5 |