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6DZ2

Crystal structure of human 5'-deoxy-5'-methylthioadenosine phosphorylase in complex with (3R,4S)-1-((4-amino-5H-pyrrolo[3,2-d]pyrimidin-7-yl)methyl)-4-(((3-(1-benzyl-1H-1,2,3-triazol-4-yl)propyl)thio)methyl)pyrrolidin-3-ol

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 31-ID
Synchrotron siteAPS
Beamline31-ID
Temperature [K]100
Detector technologyCCD
Collection date2017-12-12
DetectorRAYONIX MX225HE
Wavelength(s)0.97931
Spacegroup nameC 2 2 21
Unit cell lengths79.390, 135.316, 159.268
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution79.630 - 1.990
R-factor0.20294
Rwork0.201
R-free0.23575
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5tc6
RMSD bond length0.010
RMSD bond angle1.516
Data reduction softwareiMOSFLM
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0189)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]79.6302.040
High resolution limit [Å]1.9901.990
Number of reflections590174097
<I/σ(I)>13.41.9
Completeness [%]99.9
Redundancy7.4
CC(1/2)0.9900.730
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP4.6295100 mM sodium acetate trihydrate, pH 4.6, 2.0 M sodium chloride

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