6C8M
RNA-activated 2-AIpG monomer, 1.5h soaking
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 8.2.2 |
Synchrotron site | ALS |
Beamline | 8.2.2 |
Temperature [K] | 99 |
Detector technology | CCD |
Collection date | 2016-05-19 |
Detector | MAR CCD 130 mm |
Wavelength(s) | 1 |
Spacegroup name | P 3 2 1 |
Unit cell lengths | 47.874, 47.874, 82.731 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 50.000 - 2.400 |
R-factor | 0.24164 |
Rwork | 0.240 |
R-free | 0.27196 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5dhc |
RMSD bond length | 0.021 |
RMSD bond angle | 2.773 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0135) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.490 |
High resolution limit [Å] | 2.400 | 2.400 |
Rmerge | 0.104 | 0.732 |
Rmeas | 0.128 | 0.905 |
Rpim | 0.072 | 0.523 |
Number of reflections | 4326 | 428 |
<I/σ(I)> | 10.64 | 1.22 |
Completeness [%] | 94.1 | 96.4 |
Redundancy | 2.7 | 2.6 |
CC(1/2) | 0.977 | 0.914 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 291 | 10% v/v (+/-)-2-Methyl-2,4-pentanediol, 0.040 M Sodium cacodylate trihydrate pH 7.0, 0.012 M Spermine tetrahydrochloride, 0.080 M Sodium chloride, 0.020 M Magnesium chloride |