Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6C8K

RNA-activated 2-AIpG monomer complex, 30 min soaking

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALS BEAMLINE 8.2.2
Synchrotron siteALS
Beamline8.2.2
Temperature [K]99
Detector technologyCCD
Collection date2017-10-25
DetectorMAR CCD 130 mm
Wavelength(s)1
Spacegroup nameP 3 2 1
Unit cell lengths48.103, 48.103, 82.197
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution50.000 - 2.259
R-factor0.22735
Rwork0.223
R-free0.30223
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5dhc
RMSD bond length0.020
RMSD bond angle2.624
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0158)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0002.430
High resolution limit [Å]2.3502.350
Rmerge0.0910.354
Rmeas0.1010.396
Rpim0.0420.175
Number of reflections4919508
<I/σ(I)>222.22
Completeness [%]92.355.2
Redundancy5.34.3
CC(1/2)0.9880.954
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP729110% v/v (+/-)-2-Methyl-2,4-pentanediol, 0.040 M Sodium cacodylate trihydrate pH 7.0, 0.012 M Spermine tetrahydrochloride, 0.080 M Sodium chloride, 0.020 M Magnesium chloride

220760

PDB entries from 2024-06-05

PDB statisticsPDBj update infoContact PDBjnumon