6BR3
Structure of RORgt in complex with a novel inverse agonist TAK-828.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-E |
Synchrotron site | APS |
Beamline | 24-ID-E |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2015-04-13 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 1 |
Spacegroup name | P 61 |
Unit cell lengths | 99.537, 99.537, 127.524 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 25.000 - 3.000 |
R-factor | 0.1979 |
Rwork | 0.196 |
R-free | 0.23870 |
RMSD bond length | 0.009 |
RMSD bond angle | 1.391 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | REFMAC |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 3.050 |
High resolution limit [Å] | 3.000 | 8.130 | 3.000 |
Rmerge | 0.178 | 0.045 | |
Rmeas | 0.188 | 0.047 | |
Rpim | 0.084 | 0.015 | 0.961 |
Total number of observations | 136276 | ||
Number of reflections | 14399 | 746 | 730 |
<I/σ(I)> | 4.3 | ||
Completeness [%] | 100.0 | 99.9 | 100 |
Redundancy | 9.5 | 9.3 | 9.6 |
CC(1/2) | 0.999 | 0.426 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 291 | 3%MDP, 1.6M NaFormate, 0.1M HEPES pH 7.5 |