6BNM
Crystal Structure of the P-Rex2 PH domain
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-D |
Synchrotron site | APS |
Beamline | 21-ID-D |
Temperature [K] | 110 |
Detector technology | CCD |
Collection date | 2015-04-23 |
Detector | MARMOSAIC 300 mm CCD |
Wavelength(s) | 1.078 |
Spacegroup name | P 31 2 1 |
Unit cell lengths | 60.105, 60.105, 86.238 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 52.050 - 1.900 |
R-factor | 0.1928 |
Rwork | 0.191 |
R-free | 0.23160 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5d27 |
RMSD bond length | 0.011 |
RMSD bond angle | 1.447 |
Data reduction software | HKL-2000 |
Data scaling software | SCALEPACK (2.5.7) |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0155) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 52.050 | 50.000 | 1.930 |
High resolution limit [Å] | 1.900 | 5.160 | 1.900 |
Rmerge | 0.064 | 0.036 | 0.713 |
Rmeas | 0.069 | 0.039 | 0.799 |
Rpim | 0.024 | 0.014 | 0.350 |
Number of reflections | 14598 | 788 | 700 |
<I/σ(I)> | 10.1 | ||
Completeness [%] | 99.0 | 95.3 | 96.8 |
Redundancy | 7.2 | 7.1 | 4.5 |
CC(1/2) | 0.999 | 0.726 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5 | 295 | 0.1 M Sodium Acetate pH 5, 3.325 M Sodium Chloride |