5YXF
Mycobacterium Tuberculosis Methionine aminopeptidase type 1c (C105L mutant) in complex with Methionine
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 HF |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2017-12-03 |
Detector | RIGAKU RAXIS IV |
Wavelength(s) | 1.54 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 49.302, 48.326, 56.225 |
Unit cell angles | 90.00, 95.19, 90.00 |
Refinement procedure
Resolution | 35.370 - 1.610 |
R-factor | 0.1714 |
Rwork | 0.169 |
R-free | 0.20680 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1yj3 |
RMSD bond length | 0.020 |
RMSD bond angle | 2.038 |
Data reduction software | DENZO (2.3.1) |
Data scaling software | SCALEPACK (2.2.0) |
Phasing software | HKL-2000 |
Refinement software | REFMAC (5.8.0135) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 35.370 | 36.000 | 1.670 |
High resolution limit [Å] | 1.610 | 3.470 | 1.610 |
Rmerge | 0.055 | 0.060 | 0.350 |
Rmeas | 0.076 | 0.082 | 0.483 |
Rpim | 0.052 | 0.057 | 0.331 |
Number of reflections | 33848 | 6685 | 5684 |
<I/σ(I)> | 17.7 | ||
Completeness [%] | 96.5 | 99.7 | 84.9 |
Redundancy | 1.9 | 1.9 | 1.7 |
CC(1/2) | 0.986 | 0.979 | 0.865 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 298 | 0.1M Hepes pH 7.5, 27% Peg3350, 3% glycerol |