5YPU
Crystal structure of an actin monomer in complex with the nucleator Cordon-Bleu MET72NLE WH2-motif peptide
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSRRC BEAMLINE BL13B1 |
Synchrotron site | NSRRC |
Beamline | BL13B1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2016-02-29 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 1.00 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 174.861, 40.832, 109.000 |
Unit cell angles | 90.00, 101.76, 90.00 |
Refinement procedure
Resolution | 29.820 - 2.000 |
R-factor | 0.1954 |
Rwork | 0.193 |
R-free | 0.24030 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4jhd |
RMSD bond length | 0.010 |
RMSD bond angle | 1.395 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0073) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 29.820 | 30.000 | 2.030 |
High resolution limit [Å] | 2.000 | 5.420 | 2.000 |
Rmerge | 0.088 | 0.030 | 0.529 |
Rmeas | 0.103 | 0.036 | 0.639 |
Rpim | 0.054 | 0.019 | 0.353 |
Number of reflections | 51425 | 2737 | 2517 |
<I/σ(I)> | 7.1 | ||
Completeness [%] | 99.5 | 99.9 | 97.4 |
Redundancy | 3.6 | 3.6 | 3.1 |
CC(1/2) | 0.998 | 0.800 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 4.9 | 298.15 | 20mM MES pH 4.9, 0.2mM CaCl2,2H2O, 20%(w/v) PEG 3,350 |