5YPJ
Mycobacterium Tuberculosis Methionine aminopeptidase type 1c (C105N mutant).
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 HF |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2015-04-09 |
Detector | RIGAKU RAXIS IV++ |
Wavelength(s) | 1.54 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 49.285, 48.536, 56.353 |
Unit cell angles | 90.00, 95.00, 90.00 |
Refinement procedure
Resolution | 28.630 - 2.010 |
R-factor | 0.1617 |
Rwork | 0.159 |
R-free | 0.20820 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1yj3 |
RMSD bond length | 0.018 |
RMSD bond angle | 1.874 |
Data reduction software | DENZO (2.3.1) |
Data scaling software | SCALEPACK (2.2.0) |
Phasing software | HKL-2000 |
Refinement software | REFMAC (5.8.0135) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 28.630 | 4.700 | 2.080 |
High resolution limit [Å] | 2.010 | 4.330 | 2.010 |
Rmerge | 0.045 | 0.022 | 0.210 |
Rmeas | 0.061 | 0.030 | 0.283 |
Rpim | 0.041 | 0.021 | 0.187 |
Number of reflections | 17832 | 3458 | 3431 |
<I/σ(I)> | 16.7 | ||
Completeness [%] | 100.0 | 100 | 99.8 |
Redundancy | 1.9 | 2 | 1.8 |
CC(1/2) | 0.998 | 0.998 | 0.908 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 298 | 0.1M Hepes, 27% Peg3350, 3% Glycerol |