5YI7
Crystal structure of drosophila Numb PTB domain and Pon peptide complex
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL17U1 |
Synchrotron site | SSRF |
Beamline | BL17U1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2015-07-03 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.9792 |
Spacegroup name | P 31 1 2 |
Unit cell lengths | 65.593, 65.593, 143.879 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 27.865 - 1.700 |
R-factor | 0.1949 |
Rwork | 0.194 |
R-free | 0.21760 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3f0w |
RMSD bond length | 0.011 |
RMSD bond angle | 1.138 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX ((1.11.1_2575: ???)) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.730 |
High resolution limit [Å] | 1.700 | 4.610 | 1.700 |
Rmerge | 0.056 | 0.026 | 0.795 |
Rmeas | 0.059 | 0.028 | 0.838 |
Rpim | 0.018 | 0.009 | 0.260 |
Total number of observations | 384771 | ||
Number of reflections | 39132 | 2043 | 1916 |
<I/σ(I)> | 12.7 | ||
Completeness [%] | 99.3 | 97.7 | 97.7 |
Redundancy | 9.8 | 10.6 | 9.4 |
CC(1/2) | 0.999 | 0.875 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | EVAPORATION | 4.3 | 289 | 0,2M MgCl2.6H2O,25% PEG 3350,0.1M Bis-Tris |