Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5YCE

Sperm whale myoglobin swMb

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSPRING-8 BEAMLINE BL38B1
Synchrotron siteSPring-8
BeamlineBL38B1
Temperature [K]100
Detector technologyCCD
Collection date2015-07-17
DetectorADSC QUANTUM 315
Wavelength(s)0.8000
Spacegroup nameP 1 21 1
Unit cell lengths34.180, 30.660, 63.570
Unit cell angles90.00, 105.49, 90.00
Refinement procedure
Resolution9.949 - 0.770
R-factor0.1448
Rwork0.144
R-free0.16150
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3rgk
RMSD bond length0.013
RMSD bond angle1.529
Data reduction softwareiMOSFLM
Data scaling softwareSCALA
Phasing softwarePHENIX
Refinement softwarePHENIX (1.11.1_2575)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]10.0000.810
High resolution limit [Å]0.7700.770
Rmerge0.138
Number of reflections148979
<I/σ(I)>20.55.6
Completeness [%]99.398.2
Redundancy4.52.3
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1BATCH MODE29176% saturated ammonium sulfate

219515

PDB entries from 2024-05-08

PDB statisticsPDBj update infoContact PDBjnumon