Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5WXV

The crystal structure of VabB-ICL domain from Vibrio anguillarum 775

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRF BEAMLINE BL17U
Synchrotron siteSSRF
BeamlineBL17U
Temperature [K]100
Detector technologyCCD
Collection date2016-11-14
DetectorMAR CCD 130 mm
Wavelength(s)0.9791
Spacegroup nameP 1 21 1
Unit cell lengths49.527, 173.882, 143.764
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution47.921 - 2.300
R-factor0.209
Rwork0.206
R-free0.27340
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5gle
RMSD bond length0.008
RMSD bond angle1.018
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHENIX
Refinement softwarePHENIX ((1.11.1_2575: ???))
Data quality characteristics
 Overall
Low resolution limit [Å]47.921
High resolution limit [Å]2.300
Number of reflections107112
<I/σ(I)>2.5
Completeness [%]99.5
Redundancy15
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP29310% PEG8000, 0.1M imidazole, 0.2M calcium acetate

221051

PDB entries from 2024-06-12

PDB statisticsPDBj update infoContact PDBjnumon