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5VG7

Crystal Structure of the R503Q missense variant of human PGM1

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALS BEAMLINE 4.2.2
Synchrotron siteALS
Beamline4.2.2
Temperature [K]100
Detector technologyCMOS
Collection date2016-02-02
DetectorRDI CMOS_8M
Wavelength(s)1.00003
Spacegroup nameP 41 21 2
Unit cell lengths172.131, 172.131, 99.805
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution60.857 - 1.950
R-factor0.171520290168
Rwork0.169
R-free0.21294
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5epc
RMSD bond length0.007
RMSD bond angle0.812
Data reduction softwareXDS
Data scaling softwareSCALA
Phasing softwarePHENIX (1.11.1_2575)
Refinement softwarePHENIX (1.11.1_2575)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]60.9501.980
High resolution limit [Å]1.9501.950
Rmerge0.1401.902
Rpim0.0380.526
Number of reflections1089945314
<I/σ(I)>15.11.5
Completeness [%]100.099.9
Redundancy14.314
CC(1/2)0.9990.709
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7.52930.1 M Tris/HCl pH:7.5, 1.8 M Ammonium Sulfate, 16mg/mL

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