5V57
3.0A SYN structure of the multi-domain human smoothened receptor in complex with TC114
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL41XU |
Synchrotron site | SPring-8 |
Beamline | BL41XU |
Temperature [K] | 77 |
Detector technology | PIXEL |
Collection date | 2015-05-20 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 1.0000 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 40.080, 356.360, 59.090 |
Unit cell angles | 90.00, 102.79, 90.00 |
Refinement procedure
Resolution | 48.380 - 3.000 |
R-factor | 0.205 |
Rwork | 0.203 |
R-free | 0.24000 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5v56 |
RMSD bond length | 0.009 |
RMSD bond angle | 0.930 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | BUSTER (2.10.2) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 48.380 | 3.160 |
High resolution limit [Å] | 3.000 | 3.000 |
Rmerge | 0.117 | 0.393 |
Number of reflections | 29571 | |
<I/σ(I)> | 7.5 | 1.9 |
Completeness [%] | 91.9 | 81.3 |
Redundancy | 3.7 | 2.3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | LIPIDIC CUBIC PHASE | 5 | 293 | 100 mM Sodium citrate tribasic dihydrate pH 5.0, 36% (v/v) PEG 400, 50-200 mM Ammonium nitrate |