5V2M
Mevalonate diphosphate mediated ATP binding mechanism of the mevalonate diphosphate decarboxylase from Enterococcus faecalis
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 19-BM |
Synchrotron site | APS |
Beamline | 19-BM |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2013-08-16 |
Detector | ADSC QUANTUM 210r |
Wavelength(s) | 0.9794 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 81.934, 98.078, 46.078 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 19.673 - 1.989 |
R-factor | 0.1807 |
Rwork | 0.179 |
R-free | 0.20350 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5v2l |
RMSD bond length | 0.012 |
RMSD bond angle | 1.101 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX ((1.11.1_2575: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 20.000 | 2.070 |
High resolution limit [Å] | 2.000 | 2.000 |
Rpim | 0.027 | 0.058 |
Number of reflections | 26117 | |
<I/σ(I)> | 17.4 | |
Completeness [%] | 95.4 | |
Redundancy | 5.9 | |
CC(1/2) | 0.991 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 4.6 | 293 | 1.6 M ammonium sulfate, 50 mM sodium acetate, pH 4.6 |