5TW0
Structure of Pfp1 protease from Thermococcus thioreducens: small cell H3 crystal form
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 HF |
Temperature [K] | 298 |
Detector technology | CCD |
Collection date | 2013-04-19 |
Detector | RIGAKU SATURN 944+ |
Wavelength(s) | 1.54187 |
Spacegroup name | H 3 |
Unit cell lengths | 91.576, 91.576, 118.705 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 32.970 - 1.960 |
R-factor | 0.1502 |
Rwork | 0.148 |
R-free | 0.19420 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | partially refined model from a different crystal form |
RMSD bond length | 0.008 |
RMSD bond angle | 1.120 |
Data reduction software | MOSFLM (7.1.3) |
Data scaling software | Aimless (0.5.8) |
Phasing software | PHASER (2.5.7) |
Refinement software | REFMAC (5.8.0107) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 32.970 | 32.970 | 2.010 |
High resolution limit [Å] | 1.960 | 8.980 | 1.960 |
Rmerge | 0.135 | 0.075 | 0.424 |
Number of reflections | 23283 | ||
<I/σ(I)> | 10.9 | 33.3 | 1.4 |
Completeness [%] | 87.2 | 97.5 | 28 |
Redundancy | 9.5 | 21.1 | 1.2 |
CC(1/2) | 0.998 | 0.997 | 0.537 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 293 | 20% PEG 3350, 0.2 M sodium citrate |