5QRD
PanDDA analysis group deposition -- Crystal Structure of human ALAS2A in complex with Z1328968520
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04-1 |
Synchrotron site | Diamond |
Beamline | I04-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-04-05 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.91587 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 127.972, 108.831, 76.076 |
Unit cell angles | 90.00, 109.15, 90.00 |
Refinement procedure
Resolution | 80.880 - 1.760 |
R-factor | 0.2268 |
Rwork | 0.225 |
R-free | 0.25530 |
Structure solution method | FOURIER SYNTHESIS |
Starting model (for MR) | 6hrh |
RMSD bond length | 0.008 |
RMSD bond angle | 1.559 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | REFMAC |
Refinement software | REFMAC (5.8.0238) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 71.867 | 71.867 | 1.861 |
High resolution limit [Å] | 1.763 | 5.101 | 1.763 |
Rmeas | 0.060 | 0.032 | 0.962 |
Rpim | 0.032 | 0.017 | 0.524 |
Total number of observations | 280349 | 13787 | 13509 |
Number of reflections | 80975 | ||
<I/σ(I)> | 12.6 | 35.7 | 1.4 |
Completeness [%] | 95.0 | 98.9 | 68.7 |
Redundancy | 3.5 | 3.4 | 3.3 |
CC(1/2) | 0.999 | 0.999 | 0.536 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 298 | 0.1 M HEPES pH 7.5, 0.2 M magnesium chloride, 20% PEG3350 |