5QMY
Group deposition of library data - Crystal Structure of EcDsbA after initial refinement with no ligand modelled (structure G4_1)
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | AUSTRALIAN SYNCHROTRON BEAMLINE MX1 |
| Synchrotron site | Australian Synchrotron |
| Beamline | MX1 |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2018-04-18 |
| Detector | ADSC QUANTUM 210r |
| Wavelength(s) | 0.95370 |
| Spacegroup name | C 1 2 1 |
| Unit cell lengths | 117.744, 64.120, 74.489 |
| Unit cell angles | 90.00, 125.80, 90.00 |
Refinement procedure
| Resolution | 37.180 - 2.217 |
| R-factor | 0.2265 |
| Rwork | 0.224 |
| R-free | 0.27570 |
| Structure solution method | MOLECULAR REPLACEMENT |
| RMSD bond length | 0.010 |
| RMSD bond angle | 1.262 |
| Data reduction software | XDS |
| Data scaling software | Aimless (0.5.32) |
| Phasing software | MOLREP |
| Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 48.560 | 48.560 | 2.280 |
| High resolution limit [Å] | 2.210 | 9.100 | 2.210 |
| Rmerge | 0.067 | 0.018 | 0.674 |
| Rmeas | 0.077 | 0.021 | 0.781 |
| Rpim | 0.037 | 0.011 | 0.389 |
| Total number of observations | 92399 | 1288 | 6252 |
| Number of reflections | 22324 | 350 | 1567 |
| <I/σ(I)> | 12.1 | 41 | 1.9 |
| Completeness [%] | 97.9 | 98.8 | 80.3 |
| Redundancy | 4.1 | 3.7 | 4 |
| CC(1/2) | 0.999 | 0.999 | 0.782 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 6.1 | 293 | 11-13% PEG 8000 5-7.5% GLYCEROL 1 MM CUCL2 100 MM SODIUM CACODYLATE |
