5QMW
Group deposition of library data - Crystal Structure of EcDsbA after initial refinement with no ligand modelled (structure G2_1)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | AUSTRALIAN SYNCHROTRON BEAMLINE MX1 |
Synchrotron site | Australian Synchrotron |
Beamline | MX1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2018-04-18 |
Detector | ADSC QUANTUM 210r |
Wavelength(s) | 0.95370 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 117.780, 64.362, 74.499 |
Unit cell angles | 90.00, 125.82, 90.00 |
Refinement procedure
Resolution | 34.753 - 1.959 |
R-factor | 0.233 |
Rwork | 0.232 |
R-free | 0.28210 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.010 |
RMSD bond angle | 1.325 |
Data reduction software | XDS |
Data scaling software | Aimless (0.5.32) |
Phasing software | MOLREP |
Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 34.750 | 34.750 | 2.010 |
High resolution limit [Å] | 1.960 | 8.980 | 1.960 |
Rmerge | 0.059 | 0.031 | 0.691 |
Rmeas | 0.068 | 0.036 | 0.794 |
Rpim | 0.033 | 0.018 | 0.386 |
Total number of observations | 132959 | 1290 | 8988 |
Number of reflections | 32239 | 351 | 2206 |
<I/σ(I)> | 9.7 | 24.7 | 1.3 |
Completeness [%] | 98.8 | 95.9 | 96.8 |
Redundancy | 4.1 | 3.7 | 4.1 |
CC(1/2) | 0.998 | 0.998 | 0.820 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.1 | 293 | 11-13% PEG 8000 5-7.5% GLYCEROL 1 MM CUCL2 100 MM SODIUM CACODYLATE |