5PFN
PanDDA analysis group deposition -- Crystal Structure of BAZ2B after initial refinement with no ligand modelled (structure 151)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04-1 |
Synchrotron site | Diamond |
Beamline | I04-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2013-03-10 |
Detector | DECTRIS PILATUS 2M |
Wavelength(s) | 0.9200 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 81.633, 96.930, 57.910 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 30.040 - 1.720 |
R-factor | 0.1834 |
Rwork | 0.182 |
R-free | 0.21240 |
Structure solution method | FOURIER SYNTHESIS |
Starting model (for MR) | 3g0l |
RMSD bond length | 0.024 |
RMSD bond angle | 2.017 |
Data reduction software | XDS |
Data scaling software | Aimless (0.1.29) |
Phasing software | REFMAC |
Refinement software | REFMAC (5.8.0131) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 30.040 | 30.040 | 1.750 |
High resolution limit [Å] | 1.720 | 9.100 | 1.720 |
Rmerge | 0.061 | 0.040 | 0.745 |
Rmeas | 0.066 | 0.043 | 0.860 |
Rpim | 0.026 | 0.016 | 0.417 |
Total number of observations | 142659 | 1188 | 4002 |
Number of reflections | 24537 | ||
<I/σ(I)> | 14.6 | 45.2 | 1.4 |
Completeness [%] | 99.0 | 97.5 | 88.7 |
Redundancy | 5.8 | 6.1 | 3.5 |
CC(1/2) | 0.999 | 0.999 | 0.731 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7 | 277 | 30% PEG600 -- 0.1M MES pH 6.0 |