5PAI
human factor VIIa in complex with N-(2-amino-1H-benzimidazol-5-yl)-1-[3-[[(3,5-dimethyl-1,2-oxazol-4-yl)carbamoylamino]methyl]phenyl]-5-hydroxypyrazole-4-carboxamide at 1.73A
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X10SA |
Synchrotron site | SLS |
Beamline | X10SA |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2008-10-03 |
Detector | MARMOSAIC 225 mm CCD |
Wavelength(s) | 1.000000 |
Spacegroup name | P 41 21 2 |
Unit cell lengths | 95.390, 95.390, 116.320 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 36.890 - 1.730 |
R-factor | 0.1647 |
Rwork | 0.164 |
R-free | 0.18150 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | inhouse model |
RMSD bond length | 0.016 |
RMSD bond angle | 1.589 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | REFMAC (5.5.0057) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 36.880 | 36.880 | 1.780 |
High resolution limit [Å] | 1.730 | 7.760 | 1.730 |
Rmerge | 0.059 | 0.025 | 0.300 |
Rmeas | 0.064 | 0.027 | 0.324 |
Total number of observations | 399215 | ||
Number of reflections | 56045 | 701 | 3942 |
<I/σ(I)> | 18.87 | 29.85 | 6.05 |
Completeness [%] | 99.7 | 92.5 | 97.5 |
Redundancy | 7.12 | ||
CC(1/2) | 0.999 | 0.999 | 0.957 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 277 | 16 mg/ml protein in 20mM Tris/HCl pH 8.4, 5 mM benzamidine, 0.1 M NaCl, 50 mM CaCl2 mixed 1+1 with 32-35% AMMONIUM SULPHATE, 2% PEG 4000, 0.1 M Bicine-NaOH pH 8.5, 15% glycerol |