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5NGT

Crystal structure of human MTH1 in complex with inhibitor 7-(furan-2-yl)-5-methyl-1,3-benzoxazol-2-amine

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsBESSY BEAMLINE 14.1
Synchrotron siteBESSY
Beamline14.1
Temperature [K]100
Detector technologyPIXEL
Collection date2016-09-15
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.9184
Spacegroup nameP 2 21 21
Unit cell lengths36.326, 60.617, 66.672
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution44.850 - 1.540
R-factor0.18588
Rwork0.184
R-free0.22031
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3zr1
RMSD bond length0.015
RMSD bond angle1.708
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0158)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]44.8501.560
High resolution limit [Å]1.5401.540
Rmerge0.1021.182
Number of reflections224551056
<I/σ(I)>121.6
Completeness [%]1.096.6
Redundancy7.27
CC(1/2)0.9980.559
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP2935 mmol/L compound and 6 mmol/L MgCl2 were added to MTH1. Sitting drop vapor diffusion experiments at 293K were performed, and MTH1 (9.34 mg/mL) was mixed with reservoir solution (32% (w/v) PEG3350, 0.1 mol/L Sodium Acetate pH 4.0 and 0.2 mol/L LiSO4) in a 1:1 ratio.

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