5N2V
Changes in conformational equilibria regulate the activity of the Dcp2 decapping enzyme
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X10SA |
Synchrotron site | SLS |
Beamline | X10SA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-10-02 |
Detector | PSI PILATUS 6M |
Wavelength(s) | 0.99 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 63.841, 76.522, 89.526 |
Unit cell angles | 90.00, 102.83, 90.00 |
Refinement procedure
Resolution | 48.289 - 3.100 |
R-factor | 0.2414 |
Rwork | 0.239 |
R-free | 0.28680 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5j3t |
RMSD bond length | 0.002 |
RMSD bond angle | 0.487 |
Data reduction software | XDS |
Data scaling software | SCALA |
Phasing software | PHASER |
Refinement software | PHENIX ((1.11.1_2575: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 48.300 | 3.270 |
High resolution limit [Å] | 3.100 | 3.100 |
Rmerge | 0.240 | 0.730 |
Number of reflections | 15440 | |
<I/σ(I)> | 4.3 | 1.8 |
Completeness [%] | 99.9 | 100 |
Redundancy | 3.4 | 3.4 |
CC(1/2) | 0.950 | 0.640 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7 | 293 | 41% M1K3350 Morpheus Mix 4, MOPS pH 7.0, 0.06 M MgCl2/CaCl2 |