5MZZ
Crystal structure of the decarboxylase AibA/AibB in complex with 3-methylglutaconate
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 HF |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2014-03-21 |
Detector | RIGAKU SATURN 944 |
Wavelength(s) | 1.54 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 66.962, 93.129, 90.798 |
Unit cell angles | 90.00, 104.36, 90.00 |
Refinement procedure
Resolution | 26.820 - 2.300 |
R-factor | 0.1803 |
Rwork | 0.179 |
R-free | 0.20720 |
Structure solution method | FOURIER SYNTHESIS |
Starting model (for MR) | 5mzw |
RMSD bond length | 0.003 |
RMSD bond angle | 0.563 |
Data reduction software | XDS |
Data scaling software | Aimless (0.1.29) |
Phasing software | PHENIX |
Refinement software | PHENIX (1.10.1_2155) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 26.820 | 26.820 | 2.380 |
High resolution limit [Å] | 2.300 | 8.910 | 2.300 |
Rmerge | 0.178 | 0.076 | 0.538 |
Rmeas | 0.204 | ||
Rpim | 0.099 | ||
Total number of observations | 200861 | ||
Number of reflections | 47619 | ||
<I/σ(I)> | 6.6 | ||
Completeness [%] | 99.1 | 95.8 | 98 |
Redundancy | 4.2 | 4 | 4.2 |
CC(1/2) | 0.981 | 0.989 | 0.829 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | 0.085 M sodium acetate, 0.17 M ammonium acetate, 15 % glycerol, 25 % PEG4000 |