5MIY
Crystal structure of the E3 ubiquitin ligase RavN from Legionella pneumophila
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALBA BEAMLINE XALOC |
Synchrotron site | ALBA |
Beamline | XALOC |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2013-07-02 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.978870 |
Spacegroup name | C 2 2 2 |
Unit cell lengths | 114.160, 177.010, 79.450 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 46.357 - 1.717 |
R-factor | 0.1624 |
Rwork | 0.161 |
R-free | 0.19490 |
Structure solution method | SIRAS |
Data reduction software | XSCALE |
Data scaling software | XSCALE |
Phasing software | SHELX |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 47.969 | 47.969 | 1.820 |
High resolution limit [Å] | 1.720 | 5.120 | 1.720 |
Rmerge | 0.055 | 0.032 | 0.874 |
Rmeas | 0.057 | 0.033 | 0.910 |
Total number of observations | 1134512 | ||
Number of reflections | 85768 | 3443 | 13538 |
<I/σ(I)> | 24.57 | 71.84 | 3.14 |
Completeness [%] | 99.7 | 99.3 | 98.6 |
Redundancy | 13.228 | 12.199 | 12.741 |
CC(1/2) | 0.999 | 0.999 | 0.719 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.4 | 291 | 1.5 M Ammonium sulphate, 0.1 M NaCitrate pH 5.4 and 0.2 M K/Na Tartrate |