5LSH
human lysozyme in complex with a tetrasaccharide fragment of the O-chain of LPS from Klebsiella pneumoniae
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PETRA III, EMBL c/o DESY BEAMLINE P13 (MX1) |
Synchrotron site | PETRA III, EMBL c/o DESY |
Beamline | P13 (MX1) |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-10-24 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.9762 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 33.108, 56.040, 60.531 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 30.265 - 1.061 |
R-factor | 0.1813 |
Rwork | 0.180 |
R-free | 0.20320 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1rex |
RMSD bond length | 0.013 |
RMSD bond angle | 1.569 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | MOLREP |
Refinement software | PHENIX ((1.10.1_2155)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 30.265 | 1.099 |
High resolution limit [Å] | 1.061 | 1.061 |
Rmerge | 0.072 | |
Number of reflections | 47721 | |
<I/σ(I)> | 17.06 | 1.52 |
Completeness [%] | 92.0 | 69 |
Redundancy | 11.9 | 9.8 |
CC(1/2) | 1.000 | 0.633 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 291 | 0.8 M NaCl, 25 mM NaOAc, pH 5.4 |