5LFE
Protruding domain of GII.4 human norovirus isolate 8-14 in complex with HBGA type B (triglycan)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID23-2 |
Synchrotron site | ESRF |
Beamline | ID23-2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2014-11-08 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 0.9650 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 63.830, 55.420, 87.100 |
Unit cell angles | 90.00, 99.38, 90.00 |
Refinement procedure
Resolution | 46.575 - 2.300 |
R-factor | 0.2347 |
Rwork | 0.233 |
R-free | 0.27650 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4oos |
RMSD bond length | 0.004 |
RMSD bond angle | 0.881 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER (2.5.6) |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 46.580 | 2.330 | |
High resolution limit [Å] | 2.270 | 10.140 | 2.270 |
Rmerge | 0.121 | 0.039 | 0.704 |
Number of reflections | 26503 | ||
<I/σ(I)> | 7.32 | 15.17 | 1.86 |
Completeness [%] | 93.9 | 99.1 | 83.8 |
Redundancy | 3.2 | ||
CC(1/2) | 0.989 | 0.999 | 0.798 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6 | 291 | PEG6000, 0.1 M MES |