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5KQH

Crystal structure of the V293D variant of catalase-peroxidase from B. pseudomallei

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsCLSI BEAMLINE 08ID-1
Synchrotron siteCLSI
Beamline08ID-1
Temperature [K]100
Detector technologyCCD
Collection date2015-10-09
DetectorMARMOSAIC 300 mm CCD
Wavelength(s)0.97944
Spacegroup nameP 21 21 21
Unit cell lengths100.787, 113.434, 174.677
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution47.561 - 1.820
R-factor0.1559
Rwork0.154
R-free0.18390
Starting model (for MR)1MWV
RMSD bond length0.027
RMSD bond angle2.264
Data reduction softwareXDS
Data scaling softwareSCALA (3.3.21)
Refinement softwareREFMAC (5.8.0151)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]47.56147.5611.920
High resolution limit [Å]1.8205.7601.820
Rmerge0.0190.475
Rmeas0.081
Rpim0.038
Total number of observations765833
Number of reflections178897
<I/σ(I)>14.234.11.6
Completeness [%]99.998.7100
Redundancy4.34.24.4
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP6.1293MPD, 0.1 M sodium citrate

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PDB entries from 2024-05-15

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