5KQ2
Crystal structure of the A357D variant of catalase-peroxidase from B. pseudomallei
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | CLSI BEAMLINE 08ID-1 |
Synchrotron site | CLSI |
Beamline | 08ID-1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2015-10-09 |
Detector | MARMOSAIC 300 mm CCD |
Wavelength(s) | 0.97944 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 100.827, 114.130, 174.989 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 47.776 - 1.900 |
R-factor | 0.1577 |
Rwork | 0.156 |
R-free | 0.19130 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1MWV |
RMSD bond length | 0.023 |
RMSD bond angle | 2.031 |
Data reduction software | XDS |
Data scaling software | SCALA (3.3.21) |
Refinement software | REFMAC (5.8.0151) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 47.776 | 47.776 | 2.000 |
High resolution limit [Å] | 1.900 | 6.010 | 1.900 |
Rmerge | 0.023 | 0.474 | |
Rmeas | 0.085 | ||
Rpim | 0.047 | ||
Total number of observations | 453719 | ||
Number of reflections | 154155 | ||
<I/σ(I)> | 10.6 | 25.4 | 1.6 |
Completeness [%] | 97.3 | 92.4 | 99.3 |
Redundancy | 2.9 | 3 | 2.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.1 | 293 | MPD |