5KN9
MutY N-terminal domain in complex with DNA containing an intrahelical oxoG:A base-pair
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-E |
Synchrotron site | APS |
Beamline | 24-ID-E |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2015-04-25 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 0.97918 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 49.878, 38.759, 82.960 |
Unit cell angles | 90.00, 105.66, 90.00 |
Refinement procedure
Resolution | 79.879 - 1.930 |
R-factor | 0.1718 |
Rwork | 0.169 |
R-free | 0.22870 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1rrq |
RMSD bond length | 0.008 |
RMSD bond angle | 1.316 |
Data reduction software | XDS |
Data scaling software | SCALA |
Phasing software | PHASER |
Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 79.880 | 1.980 |
High resolution limit [Å] | 1.930 | 1.930 |
Rmerge | 0.110 | |
Number of reflections | 23193 | |
<I/σ(I)> | 10.9 | |
Completeness [%] | 99.5 | |
Redundancy | 3.6 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 298 | 300 mM Ca(OAc)2, 14% PEG 4000 |