Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5KBP

The crystal structure of an alpha-mannosidase from Enterococcus faecalis V583

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 19-ID
Synchrotron siteAPS
Beamline19-ID
Temperature [K]100
Detector technologyCCD
Collection date2013-06-15
DetectorADSC QUANTUM 315r
Wavelength(s)0.97924
Spacegroup nameP 31 2 1
Unit cell lengths127.834, 127.834, 223.716
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution50.000 - 2.400
R-factor0.1889
Rwork0.187
R-free0.23150
RMSD bond length0.002
RMSD bond angle0.465
Data reduction softwareHKL-3000
Data scaling softwareHKL-3000
Phasing softwareHKL-3000
Refinement softwarePHENIX (dev_2386)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0002.440
High resolution limit [Å]2.4002.400
Rmerge0.0770.704
Number of reflections83104
<I/σ(I)>26.12.4
Completeness [%]99.5100
Redundancy4.74.7
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP72890.2 Li2SO4, 0.1M Tris:HCl, 2.0M (NH4)2SO4

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon